New bacterial carbohydrate structure database (BCSDB)
Abstract
A new free glycomic database (Bacterial Carbohydrate Structure Database) was established. It contains data on the structure, bibliography, NMR spectra, biochemical and other properties of all bacterial carbohydrates reported before 2006. The paper describes the database architecture and interface and BCSDB structure encoding language.
About the Authors
F. V. Toukach
Институт Органической Химии
им. Н.Д. Зелинского РАН
Russian Federation
Russian Federation
I. S. Bushmarinov
Высший Химический Колледж РАН
Russian Federation
Russian Federation
Y. A. Knirel
Институт Органической Химии
им. Н.Д. Зелинского РАН
Russian Federation
Russian Federation
References
1. R. Raman, M.Venkataraman, S.Ramakrishnan, W.Lang, S.Raguram, R. Sasisekharan.
2. Advancing Glycomics: Implementation Strategies at the Consortium for Functional
3. Glycomics. Glycobiology. – 2006. – Vol. 16.– P. 82R-90R.
4. J. Lowe, J.Marth. //Annu. Rev. Biochem. – 2003. – Vol.72. – Р.643-691.
5. C. von der Lieth, T. Lutteke, M. Frank: //Biochim Biophys Acta. – 2006. – Vol. 1760. – P. 568-577.
6. D. Harvey. //Expert Rev Proteomics. – 2005. – Vol.2. – Р. 87-101.
7. Y.Guerardel, LChang, E. Maes, C. Huang, K. Khoo. //Glycobiology.–2006.–Vol.16.–Р. 244-257.
8. S. Doubet, K. Bock, D. Smith, A. Darvill, P. Albersheim. //Trends Biochem Sci. –
9. –Vol.14. – Р. 475-477.
10. T. Lutteke, A. Bohne-Lang, A. Loss, T. Götz, M. Frank, C. von der Lieth:
11. //Glycobiology.– 2006. – Vol. 16. – P. 71R-81R.
12. C. Cooper, H. Joshi, M. Harrison, M. Wilkins, N. Packer. //Nucleic Acids Res. – 2003.
13. – Vol. 31. – Р. 511-513.
14. F.V. Toukach, Y.A. Knirel: //XVIII International Symposium on Glycoconjugates,
15. Italy, Florence. – 2005. – Р. 216-217.
16. F.V. Toukach, Y.A. Knirel. //III German-Russian-Polish meeting on bacterial
17. carbohydrates, Poland, Wroclaw. – 2004. – P. O2.
For citation:
Toukach F.V., Bushmarinov I.S., Knirel Y.A. New bacterial carbohydrate structure database (BCSDB). Fine Chemical Technologies. 2006;1(4):59-66. (In Russ.)
Views: 35
Email this article 