Preview

Fine Chemical Technologies

Advanced search

Development and scaling of a chromatographic purification technology for single-domain antibodies fused to the Fc fragment of human IgG1

https://doi.org/10.32362/2410-6593-2026-21-2-188-211

EDN: LAJHYG

Abstract

Objectives. The work set out to develop a chromatographic purification technology for drugs based on modified single-domain antibodies specific to the SARS-CoV-2 virus, as well as to select the optimal parameters for the purification process and scale up this technology for production.

Methods. The study was conducted on a culture of Chinese hamster ovary (CHO) cells GAMP2C5  clone 78, CHO B5 clone 4, and CHO B10 clone 4, which were used to produce modified single-domain antibodies GAMP2C5, GAMB5, and GAMB10, respectively. Chromatographic purification was performed using AKTA pure 25 and AKTA Pilot 600s chromatographs. Quality control of the obtained drugs was carried out using high-performance liquid chromatography, capillary gel electrophoresis, dynamic light scattering, enzymelinked immunosorbent assay, and polymerase chain reaction.

Results. Multimodal chromatography using CA++Pure-HA (TOSOH, Japan) resin based on type 1 ceramic hydroxyapatite can be effectively used for the removal of aggregated antibody forms. The drugs obtained after chromatography using CA++Pure-HA resin based on type 1 ceramic hydroxyapatite have a purity of more than 97%. The developed purification technology was scaled up to purify 200 L of culture fluid after cultivation in an STR 200 bioreactor.

Conclusions. The described technology developed for purifying modified mono-domain antibodies using the CA++Pure-HA multimodal resin based on type 1 ceramic hydroxyapatite allows for the effective removal of low-molecular-weight impurities and aggregated forms of the antibody. The antibodies obtained using the developed technology are characterized by a high degree of purity and the absence of various impurities (residual protein of the producer strain, residual protein A, and residual DNA of the producer strain), as well as offering a hydrodynamic molecular radius corresponding to the theoretical value of monomeric forms of antibodies.

About the Authors

D. S. Polyansky
MIREA – Russian Technological University
Russian Federation

Dmitry S. Polyansky, Assistant Professor, I.P. Alimarin Department of Analytical Chemistry, M.V. Lomonosov Institute of Fine Chemical Technologies

Scopus Author ID 57890564200

78, Vernadskogo pr., Moscow, 119454


Competing Interests:

The authors declare no conflicts of interest.



V. V. Prokofiev
N.F. Gamaleya National Research Center for Epidemiology and Microbiology (The Gamaleya National Center), Ministry of Health of the Russian Federati
Russian Federation

Vladimir V. Prokofiev, Laboratory Research Assistant, Laboratory of Immunobiotechnology

Scopus Author ID 57300704700

18, Gamaleya ul., Moscow, 123098


Competing Interests:

The authors declare no conflicts of interest.



A. V. Samorukova
N.F. Gamaleya National Research Center for Epidemiology and Microbiology (The Gamaleya National Center), Ministry of Health of the Russian Federati
Russian Federation

Alexandra V. Samorukova, Leading Technologist, Medgamal branch

18, Gamaleya ul., Moscow, 123098


Competing Interests:

The authors declare no conflicts of interest.



F. A. Shishkonakov
N.F. Gamaleya National Research Center for Epidemiology and Microbiology (The Gamaleya National Center), Ministry of Health of the Russian Federati
Russian Federation

Fedor A. Shishkonakov, Technologist, Medgamal branch

18, Gamaleya ul., Moscow, 123098


Competing Interests:

The authors declare no conflicts of interest.



D. V. Vasiliev
N.F. Gamaleya National Research Center for Epidemiology and Microbiology (The Gamaleya National Center), Ministry of Health of the Russian Federati
Russian Federation

Dmitry V. Vasiliev, Technologist, Medgamal branch

18, Gamaleya ul., Moscow, 123098


Competing Interests:

The authors declare no conflicts of interest.



E. I. Ryabova
N.F. Gamaleya National Research Center for Epidemiology and Microbiology (The Gamaleya National Center), Ministry of Health of the Russian Federati
Russian Federation

Ekaterina I. Ryabova, Junior Researcher, Laboratory of Immunobiotechnology

Scopus Author ID 57301278100, ResearcherID AAE-7335-2022

18, Gamaleya ul., Moscow, 123098


Competing Interests:

The authors declare no conflicts of interest.



A. A. Derkaev
N.F. Gamaleya National Research Center for Epidemiology and Microbiology (The Gamaleya National Center), Ministry of Health of the Russian Federati
Russian Federation

Artem A. Derkaev, Junior Researcher, Laboratory of Immunobiotechnology

Scopus Author ID 57381507000, ResearcherID AFU-7075-2022

18, Gamaleya ul., Moscow, 123098


Competing Interests:

The authors declare no conflicts of interest.



A. I. Gosudarev
N.F. Gamaleya National Research Center for Epidemiology and Microbiology (The Gamaleya National Center), Ministry of Health of the Russian Federati
Russian Federation

Andrey I. Gosudarev, Head of the Department of Development and Scaling, Medgamal branch

18, Gamaleya ul., Moscow, 123098


Competing Interests:

The authors declare no conflicts of interest.



Yu. А. Efimova
MIREA – Russian Technological University
Russian Federation

Yuliya A. Efimova, Cand. Sci. (Chem.), Assistant Professor, I.P. Alimarin Department of Analitical Chemistry, M.V. Lomonosov Institute of Fine Chemical Technologies

Scopus Author ID 25228417800

78, Vernadskogo pr., Moscow, 119454


Competing Interests:

The authors declare no conflicts of interest.



D. V. Shcheblyakov
N.F. Gamaleya National Research Center for Epidemiology and Microbiology (The Gamaleya National Center), Ministry of Health of the Russian Federati
Russian Federation

Dmitry V. Shcheblyakov, Dr. Sci. (Biol.), Leading Researcher, Head of the Laboratory of Immunobiotechnology

Scopus Author ID 35073056900, ResearcherID E-5899-2014

18, Gamaleya ul., Moscow, 123098


Competing Interests:

The authors declare no conflicts of interest.



A. P. Karpov
N.F. Gamaleya National Research Center for Epidemiology and Microbiology (The Gamaleya National Center), Ministry of Health of the Russian Federati
Russian Federation

Andrey P. Karpov, Cand. Sci. (Biol.), Chief Technologist, Medgamal branch

Scopus Author ID 22834845200

18, Gamaleya ul., Moscow, 123098


Competing Interests:

The authors declare no conflicts of interest.



I. B. Esmagambetov
N.F. Gamaleya National Research Center for Epidemiology and Microbiology (The Gamaleya National Center), Ministry of Health of the Russian Federati
Russian Federation

Ilias B. Esmagambetov, Cand. Sci. (Biol.), Leading Researcher, Head of the Laboratory of Stromal Regulation of Immunity

Scopus Author ID 56120429700, ResearcherID E-3327-2014

18, Gamaleya ul., Moscow, 123098


Competing Interests:

The authors declare no conflicts of interest.



References

1. Mekala J.R., Nalluri H.P., Reddy P.N., Sainath S.B., Sampath Kumar N.S., Sai Kiran G.V.S.D., Dhiman R., Chamarthy S., Komaragiri R.R., Manyam R.R., Dirisala V.R. Emerging trends and therapeutic applications of monoclonal antibodies. Gene. 2024;20(925):148607. https://doi.org/10.1016/j.gene.2024.148607

2. Esposito S., Amirthalingam G., Bassetti M., Blasi F., De Rosa F.G., Halasa N.B., Principi N. Monoclonal antibodies for prophylaxis and therapy of respiratory syncytial virus, SARS-CoV-2, human immunodeficiency virus, rabies and bacterial infections: An update from the world association of infectious diseases and immunological disorders and the Italian society of antinfective therapy. Front. Immunol. 2023;14:1162342. https://doi.org/10.3389/fimmu.2023.1162342

3. Wang Z., Wang G., Lu H., Li H., Tang M., Tong A. Development of therapeutic antibodies for the treatment of diseases. Mol. Biomed. 2022;3:35. https://doi.org/10.1186/S43556-022-00100-4

4. Paul S., Konig M.F., Pardoll D.M., Bettegowda C., Papadopoulos N., Wright K.M., Gabelli S.B., Ho M., van Elsas A., Zhou S. Cancer therapy with antibodies. Nature Reviews Cancer. 2024;24(6):399–426. https://doi.org/10.1038/s41568-024-00690-x

5. Kumar M., Jalota A., Sahu S.K., Haque S. Therapeutic antibodies for the prevention and treatment of cancer. J. Biomed. Sci. 2024;31(1):6. https://doi.org/10.1186/s12929-024-00996-w

6. Kügler M., Stein C., Schwenkert M., Saul D., Vockentanz L., Huber T., et al. Stabilization and humanization of a singlechain Fv antibody fragment specific for human lymphocyte antigen CD19 by designed point mutations and CDR-grafting onto a human framework. Protein Eng. Des. Sel. 2009;22(3): 135–147. https://doi.org/10.1093/protein/gzn079

7. Jin B.K., Odongo S., Radwanska M., Magez S. Nanobodies: A review of generation, diagnostics and therapeutics. Int. J. Mol. Sci. 2023;24(6):5994. https://doi.org/10.3390/IJMS24065994

8. Klein C., Brinkmann U., Reichert J.M., Kontermann R.E. The present and future of bispecific antibodies for cancer therapy. Nat. Rev. Drug Discov. 2024;23(4):301–319. https://doi.org/10.1038/s41573-024-00896-6

9. Wang M., Ying T., Wu Y. Single-domain antibodies as therapeutics for solid tumor treatment. Acta Pharmaceutica Sinica B. 2024;14(7):2854–2868. https://doi.org/10.1016/j.apsb.2024.03.016

10. Cheng L., Chen L., Shi Y., Gu W., Ding W., Zheng X., Liu Y., Jiang J., Zheng Z. Efficacy and safety of bispecific antibodies vs. immune checkpoint blockade combination therapy in cancer: A real-world comparison. Mol. Cancer. 2024;23(1):77. https://doi.org/10.1186/s12943-024-01956-6

11. Zacharias N., Podust V.N., Kajihara K.K., Leipold D., Del Rosario G., Thayer D., Dong E., Paluch M., Fischer D., Zheng K., Lei C. A homogeneous high-DAR antibody–drug conjugate platform combining THIOMAB antibodies and XTEN polypeptides. Chem. Sci. 2022;13(11):3147–3160. https://doi.org/10.1039/D1SC05243H

12. Polyansky D.S., Ryabova E.I., Derkaev A.A., Starkov N.S., Kashapova I.S., Shcheblyakov D.V., Karpov A.P., Esmagambetov I.B. Development of technology for culturing a cell line producing a single-domain antibody fused with the Fc fragment of human IgG1. Tonk. Khim. Tekhnol. = Fine Chem. Technol. 2024;19(3):240–257. https://doi.org/10.32362/2410-6593-2024-19-3-240-257

13. Kelley B. Industrialization of mAb production technology: The bioprocessing industry at a crossroads. MAbs. 2009;1(5): 443–452. https://doi.org/10.4161/mabs.1.5.9448

14. Ulmer N., Vogg S., Müller-Späth T., Morbidelli M. Purification of Human Monoclonal Antibodies and Their Fragments. In: Steinitz M. (Ed.). Human Monoclonal Antibodies. Methods in Molecular Biology. 2019. V. 1904. P. 163–188. https://doi.org/10.1007/978-1-4939-8958-4_7

15. Esmagambetov I.B., Shcheblyakov D.V., Egorova D.A., Voronina O.L., Derkaev A.A., Voronina D.V., Popova O., Ryabova E.I., Shcherbinin D.N., Aksenova E.I., Semenov A.N., Kunda M.S., Ryzhova N.N., Zubkova O.V., Tukhvatulin A.I., Logunov D.Y., Naroditsky B.S., Borisevich S.V., Gintsburg A.L. Nanobodies Are Potential Therapeutic Agents for the Ebola Virus Infection. Acta Naturae. 2021;13(4):53–63. https://doi.org/10.32607/actanaturae.11487 ]

16. Derkaev A.A., Ryabova E.I., Esmagambetov I.B., Shcheblyakov D.V., Godakova S.A., Vinogradova I.D., Noskov A.N., Logunov D.Y., Naroditsky B.S., Gintsburg A.L. rAAV expressing recombinant neutralizing antibody for the botulinum neurotoxin type a prophylaxis. Front. Microbiol. 2022;13:960937. https://doi.org/10.3389/fmicb.2022.960937

17. Voronina D.V., Shcheblyakov D.V., Favorskaya I.A., Esmagambetov I.B., Dzharullaeva A.S., Tukhvatulin A.I., Zubkova O.V., Popova O., Kan V.Y., Bandelyuk A.S., Shmarov M.M., Logunov D.Y., Naroditskiy B.S., Gintsburg A.L. Cross-Reactive Fc-Fused Single-Domain Antibodies to Hemagglutinin Stem Region Protect Mice from Group 1 Influenza a Virus Infection. Viruses. 2022;14(11):2485. https://doi.org/10.3390/v14112485

18. Panova E.A., Kleymenov D.A., Shcheblyakov D.V., Bykonia E.N., Mazunina E.P., Dzharullaeva A.S., Zolotar A.N., Derkaev A.A., Esmagambetov I.B., Sorokin I.I., Usachev E.V., Noskov A.N., Ivanov I.A., Zatsepin T.S., Dmitriev S.E., Gushchin V.A., Naroditsky B.S., Logunov D.Y., Gintsburg A.L. Single-domain antibody delivery using an mRNA platform protects against lethal doses of botulinum neurotoxin A. Front. Immunol. 2023;14:1098302. https://doi.org/10.3389/fimmu.2023.1098302

19. Godakova S.A., Noskov A.N., Vinogradova I.D., Ugriumova G.A., Solovyev A.I., Esmagambetov I.B., Tukhvatulin AI., Logunov D.Y., Naroditsky B.S., Shcheblyakov D.V., Gintsburg A.L. Camelid VHHs Fused to Human Fc Fragments Provide Long Term Protection Against Botulinum Neurotoxin A in Mice. Toxins (Basel). 2019;11(8):464. https://doi.org/10.3390/toxins11080464

20. Esmagambetov I.B., Ryabova E.I., Derkaev A.A., Shcheblyakov D.V., Dolzhikova I.V., Favorskaya I.A., Grousova D.M., Dovgiy M.A., Prokofiev V.V., Gosudarev A.I., Byrikhina D.V., Zorkov I.D., Iliukhina A.A., Kovyrshina A.V., Shelkov A.Y., Naroditsky B.S., Logunov D.Y., Gintsburg A.L. rAAV expressing recombinant antibody for emergency prevention and long-term prophylaxis of COVID-19. Front. Immunol. 2023;14:1129245. https://doi.org/10.3389/fimmu.2023.1129245

21. Favorskaya I.A., Shcheblyakov D.V., Esmagambetov I.B., Dolzhikova I.V., Alekseeva I.A., Korobkova A.I., Voronina D.V., Ryabova E.I., Derkaev A.A., Kovyrshina A.V., et al. Single-Domain Antibodies Efficiently Neutralize SARS-CoV-2 Variants of Concern. Front. Immunol. 2022;13:822159. https://doi.org/10.3389/fimmu.2022.822159

22. Shcheblyakov D.V., Favorskaya I.A., Dolzhikova I.V., Korobkova A.I., Esmagambetov I.V., Voronina O.L., Zubkova O.V., Tukhvatulin A.I., Derkaev A.A., Ryabova E.I., Iliukhina A.A., Zorkov I.D., Grousova D.M., Reshetnikov D.A., Ryzhova N.N., Ermolova E.I., Kunda M.S., Matyuta I.O., Boyko K.M., Gintsburg A.L. Ultra-potent RBM-specific singledomain antibody broadly neutralizes multiple SARS-CoV-2 variants with picomolar activity. Int. J. Biol. Macromol. 2025; 19(Pt 3):145386. https://doi.org/10.1016/j.ijbiomac.2025.145386

23. Sedova E.S., Shcherbinin D.N., Bandelyuk A.S., Verkhovskaya L.V., Viskova N.Yu., Avdonina E.D., Prokofiev V.V., Ryabova E.I., Esmagambetov I.B., Pervoykina K.A., Bogacheva E.A., Lysenko A.A., Shmarov M.M. Method for obtaining recombinant antibodies produced by a cell line transduced with recombinant adenoviruses. Tonk. Khim. Tekhnol. = Fine Chem. Technol. 2023;18(1):48–64. https://doi.org/10.32362/2410-6593-2023-18-1-48-64

24. Derkaev A.A., Ryabova E.I., Esmagambetov I.B., Shcheblyakov D.V., Noskov A.N., Vinogradova I.D., Prokofiev V.V., Polyansky D.S., Logunov D.Y., Gintsburg A.L. A modified single-domain antibody candidate for the treatment of botulism caused by botulinum toxin type A. BIOpreparaty. Profilaktika, diagnostika, lechenie = BIOpreparations. Prevention, Diagnosis, Treatment. 2025;25(1):58–70 (in Russ.). https://doi.org/10.30895/2221-996X-2025-591


Supplementary files

1. Schematic representation of single-domain antibodies fused with the Fc fragment of human IgG1
Subject
Type Исследовательские инструменты
View (38KB)    
Indexing metadata ▾
  • A chromatographic purification technology for drugs based on modified single-domain antibodies specific to the SARS-CoV-2 virus was developed.
  • The drugs obtained after chromatography using CA++Pure-HA resin based on type 1 ceramic hydroxyapatite have a purity of more than 97%.
  • The developed purification technology was scaled up to purify 200 L of culture fluid after cultivation in an STR 200 bioreactor. 

Review

For citations:


Polyansky D.S., Prokofiev V.V., Samorukova A.V., Shishkonakov F.A., Vasiliev D.V., Ryabova E.I., Derkaev A.A., Gosudarev A.I., Efimova Yu.А., Shcheblyakov D.V., Karpov A.P., Esmagambetov I.B. Development and scaling of a chromatographic purification technology for single-domain antibodies fused to the Fc fragment of human IgG1. Fine Chemical Technologies. 2026;21(2):188-211. https://doi.org/10.32362/2410-6593-2026-21-2-188-211. EDN: LAJHYG

Views: 369

JATS XML

ISSN 2410-6593 (Print)
ISSN 2686-7575 (Online)